Detailed evaluation of cancer sequencing pipelines in different microenvironments and heterogeneity levels.
Issue Date
2021-04-20Keywords
Clinical bioinformaticsCANCER
mapping algorithms
next generation sequencing
variant discovery algorithms
Metadata
Show full item recordJournal
Turkish journal of biology = Turk biyoloji dergisiDOI
10.3906/biy-2008-8PubMed ID
33907494Item Type
ArticleLanguage
enEISSN
1303-6092ae974a485f413a2113503eed53cd6c53
10.3906/biy-2008-8
Scopus Count
Collections
Related articles
- Performance evaluation of pipelines for mapping, variant calling and interval padding, for the analysis of NGS germline panels.
- Authors: Zanti M, Michailidou K, Loizidou MA, Machattou C, Pirpa P, Christodoulou K, Spyrou GM, Kyriacou K, Hadjisavvas A
- Issue date: 2021 Apr 28
- Systematic comparison of variant calling pipelines of target genome sequencing cross multiple next-generation sequencers.
- Authors: Feng B, Lai J, Fan X, Liu Y, Wang M, Wu P, Zhou Z, Yan Q, Sun L
- Issue date: 2023
- Challenges in exome analysis by LifeScope and its alternative computational pipelines.
- Authors: Pranckevičiene E, Rančelis T, Pranculis A, Kučinskas V
- Issue date: 2015 Sep 7
- Set-theory based benchmarking of three different variant callers for targeted sequencing.
- Authors: Molina-Mora JA, Solano-Vargas M
- Issue date: 2021 Jan 7
- Detailed simulation of cancer exome sequencing data reveals differences and common limitations of variant callers.
- Authors: Hofmann AL, Behr J, Singer J, Kuipers J, Beisel C, Schraml P, Moch H, Beerenwinkel N
- Issue date: 2017 Jan 3